{
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  "Type": "Package",
  "Package": "CoordinateCleaner",
  "Title": "Automated Cleaning of Occurrence Records from Biological\nCollections",
  "Version": "3.0.1",
  "Authors@R": "c(person(given = \"Alexander\", family = \"Zizka\", email = \"zizka.alexander@gmail.com\",\nrole = c(\"aut\", \"cre\")),\nperson(given = \"Daniele\", family = \"Silvestro\", role = \"ctb\"),\nperson(given = \"Tobias\", family = \"Andermann\", role = \"ctb\"),\nperson(given = \"Josue\", family = \"Azevedo\", role = \"ctb\"),\nperson(given = \"Camila\", family = \"Duarte Ritter\", role = \"ctb\"),\nperson(given = \"Daniel\", family = \"Edler\", role = \"ctb\"),\nperson(given = \"Harith\", family = \"Farooq\", role = \"ctb\"),\nperson(given = \"Andrei\", family = \"Herdean\", role = \"ctb\"),\nperson(given = \"Maria\", family = \"Ariza\", role = \"ctb\"),\nperson(given = \"Ruud\", family = \"Scharn\", role = \"ctb\"),\nperson(given = \"Sten\", family = \"Svanteson\", role = \"ctb\"),\nperson(given = \"Niklas\", family = \"Wengstrom\", role = \"ctb\"),\nperson(given = \"Vera\", family = \"Zizka\", role = \"ctb\"),\nperson(given = \"Alexandre\", family =\"Antonelli\", role = \"ctb\"),\nperson(given = \"Bruno\", family = \"Vilela\", role = \"ctb\",\ncomment = \"Bruno updated the package to remove dependencies on sp, raster, rgdal, maptools, and rgeos packages\"),\nperson(\"Irene\", \"Steves\", role = \"rev\",\ncomment = \"Irene reviewed the package for ropensci, see <https://github.com/ropensci/onboarding/issues/210>\"),\nperson(\"Francisco\", \"Rodriguez-Sanchez\", role = \"rev\",\ncomment = \"Francisco reviewed the package for ropensci, see <https://github.com/ropensci/onboarding/issues/210>\"))",
  "Description": "Automated flagging of common spatial and temporal errors\nin biological and paleontological collection data, for the use\nin conservation, ecology and paleontology. Includes automated\ntests to easily flag (and exclude) records assigned to country\nor province centroid, the open ocean, the headquarters of the\nGlobal Biodiversity Information Facility, urban areas or the\nlocation of biodiversity institutions (museums, zoos, botanical\ngardens, universities). Furthermore identifies per species\noutlier coordinates, zero coordinates, identical\nlatitude/longitude and invalid coordinates. Also implements an\nalgorithm to identify data sets with a significant proportion\nof rounded coordinates. Especially suited for large data sets.\nThe reference for the methodology is: Zizka et al. (2019)\n<doi:10.1111/2041-210X.13152>.",
  "License": "GPL-3",
  "URL": "https://ropensci.github.io/CoordinateCleaner/",
  "BugReports": "https://github.com/ropensci/CoordinateCleaner/issues",
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  "Repository": "https://ropensci.r-universe.dev",
  "Date/Publication": "2025-05-27 10:29:27 UTC",
  "RemoteUrl": "https://github.com/ropensci/CoordinateCleaner",
  "RemoteRef": "master",
  "RemoteSha": "9195fb64154dd20a921a412b5e4d24cc18d3803c",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-04-08 11:28:31 UTC",
    "User": "root"
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  "Author": "Alexander Zizka [aut, cre],\nDaniele Silvestro [ctb],\nTobias Andermann [ctb],\nJosue Azevedo [ctb],\nCamila Duarte Ritter [ctb],\nDaniel Edler [ctb],\nHarith Farooq [ctb],\nAndrei Herdean [ctb],\nMaria Ariza [ctb],\nRuud Scharn [ctb],\nSten Svanteson [ctb],\nNiklas Wengstrom [ctb],\nVera Zizka [ctb],\nAlexandre Antonelli [ctb],\nBruno Vilela [ctb] (Bruno updated the package to remove dependencies on\nsp, raster, rgdal, maptools, and rgeos packages),\nIrene Steves [rev] (Irene reviewed the package for ropensci, see\n<https://github.com/ropensci/onboarding/issues/210>),\nFrancisco Rodriguez-Sanchez [rev] (Francisco reviewed the package for\nropensci, see <https://github.com/ropensci/onboarding/issues/210>)",
  "Maintainer": "Alexander Zizka <zizka.alexander@gmail.com>",
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  "_user": "ropensci",
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  "_created": "2026-04-08T11:28:31.000Z",
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    "message": "Merge pull request #108 from plantarum/tws_cc_sea\n\nenhancement related to terra and clarification of countrycodes\n\nFaster cc_sea(): switched terra:extract to terra:relate",
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    "cc_sea",
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    "cd_ddmm",
    "cd_round",
    "cf_age",
    "cf_equal",
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    "cf_range",
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    "clean_fossils",
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        "name",
        "type",
        "centroid.lon",
        "centroid.lat",
        "capital",
        "capital.lon",
        "capital.lat",
        "area_sqkm",
        "uncertaintyRadiusMeters",
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      ],
      "rows": 5305,
      "table": true,
      "tojson": true
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      "title": "Global Locations of Biodiversity Institutions",
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      ],
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        "type",
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      ],
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        "lat",
        "class",
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        "phylum",
        "phylum_no",
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        "early_age.1",
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        "early_int_no",
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        "genus",
        "genus_no",
        "family",
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      "table": true,
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      "topics": [
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      ]
    },
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      "title": "Global Coastlines buffered by 1 degree",
      "topics": [
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      ]
    },
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      "title": "Global Coastlines buffered by -1 degree",
      "topics": [
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    },
    {
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      "title": "Identify Coordinates in Artificial Hotspot Occurrence Inventory",
      "concept": [
        "Coordinates"
      ],
      "topics": [
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    {
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      "title": "Identify Coordinates in Vicinity of Country Capitals.",
      "concept": [
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      ]
    },
    {
      "page": "cc_cen",
      "title": "Identify Coordinates in Vicinity of Country and Province Centroids",
      "concept": [
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      ],
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      ]
    },
    {
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      "title": "Identify Coordinates Outside their Reported Country",
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        "Coordinates"
      ],
      "topics": [
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      ]
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    {
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      "title": "Identify Duplicated Records",
      "concept": [
        "Coordinates"
      ],
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      ]
    },
    {
      "page": "cc_equ",
      "title": "Identify Records with Identical lat/lon",
      "concept": [
        "Coordinates"
      ],
      "topics": [
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      ]
    },
    {
      "page": "cc_gbif",
      "title": "Identify Records Assigned to GBIF Headquarters",
      "concept": [
        "Coordinates"
      ],
      "topics": [
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      ]
    },
    {
      "page": "cc_inst",
      "title": "Identify Records in the Vicinity of Biodiversity Institutions",
      "concept": [
        "Coordinates"
      ],
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    {
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      "title": "Identify Records Outside Natural Ranges",
      "concept": [
        "Coordinates"
      ],
      "topics": [
        "cc_iucn"
      ]
    },
    {
      "page": "cc_outl",
      "title": "Identify Geographic Outliers in Species Distributions",
      "concept": [
        "Coordinates"
      ],
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        "cc_outl"
      ]
    },
    {
      "page": "cc_sea",
      "title": "Identify Non-terrestrial Coordinates",
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        "Coordinates"
      ],
      "topics": [
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    },
    {
      "page": "cc_urb",
      "title": "Identify Records Inside Urban Areas",
      "concept": [
        "Coordinates"
      ],
      "topics": [
        "cc_urb"
      ]
    },
    {
      "page": "cc_val",
      "title": "Identify Invalid lat/lon Coordinates",
      "concept": [
        "Coordinates"
      ],
      "topics": [
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      ]
    },
    {
      "page": "cc_zero",
      "title": "Identify Zero Coordinates",
      "concept": [
        "Coordinates"
      ],
      "topics": [
        "cc_zero"
      ]
    },
    {
      "page": "cd_ddmm",
      "title": "Identify Datasets with a Degree Conversion Error",
      "concept": [
        "Datasets"
      ],
      "topics": [
        "cd_ddmm"
      ]
    },
    {
      "page": "cd_round",
      "title": "Identify Datasets with Rasterized Coordinates",
      "concept": [
        "Datasets"
      ],
      "topics": [
        "cd_round"
      ]
    },
    {
      "page": "cf_age",
      "title": "Identify Fossils with Outlier Age",
      "concept": [
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      ],
      "topics": [
        "cf_age"
      ]
    },
    {
      "page": "cf_equal",
      "title": "Identify Fossils with equal min and max age",
      "concept": [
        "fossils"
      ],
      "topics": [
        "cf_equal"
      ]
    },
    {
      "page": "cf_outl",
      "title": "Identify Outlier Records in Space and Time",
      "concept": [
        "fossils"
      ],
      "topics": [
        "cf_outl"
      ]
    },
    {
      "page": "cf_range",
      "title": "Identify Fossils with Extreme Age Ranges",
      "concept": [
        "fossils"
      ],
      "topics": [
        "cf_range"
      ]
    },
    {
      "page": "clean_coordinates",
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