{
  "_id": "69df4401c5259ad4cd8dda20",
  "Package": "dendroNetwork",
  "Type": "Package",
  "Title": "Create Networks of Dendrochronological Series using Pairwise\nSimilarity",
  "Version": "0.5.5",
  "Authors@R": "c(person(given = \"Ronald\",\nfamily = \"Visser\",\nemail = \"r.m.visser@saxion.nl\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-6966-1729\")),\nperson(given = \"Angelino\",\nfamily = \"Salentino\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0002-4763-3943\")),\nperson(given = \"Andy\",\nfamily = \"Bunn\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0001-9027-2162\")),\nperson(given = \"Kaija\",\nfamily = \"Gahm\",\nrole = \"rev\",\ncomment = \"Kaija Gahm reviewed the package for rOpenSci, see https://github.com/ropensci/software-review/issues/627#issuecomment-1993235710\"),\nperson(given = \"Zachary\",\nfamily = \"Gajewski\",\nrole = \"rev\",\ncomment = \"Zachary Gajewski reviewed the package for rOpenSci, see https://github.com/ropensci/software-review/issues/627#issuecomment-2037644081\")\n)",
  "Maintainer": "Ronald Visser <r.m.visser@saxion.nl>",
  "Description": "Creating dendrochronological networks based on the\nsimilarity between tree-ring series or chronologies. The\npackage includes various functions to compare tree-ring curves\nbuilding upon the 'dplR' package. The networks can be used to\nvisualise and understand the relations between tree-ring\ncurves. These networks are also very useful to estimate the\nprovenance of wood as described in Visser (2021)\n<DOI:10.5334/jcaa.79> or wood-use within a\nstructure/context/site as described in Visser and Vorst (2022)\n<DOI:10.1163/27723194-bja10014>.",
  "License": "GPL (>= 3)",
  "biocViews": "Visualization, GraphAndNetwork, ThirdPartyClient, Network",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "Roxygen": "list(markdown = TRUE)",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/ropensci/dendroNetwork,\nhttps://docs.ropensci.org/dendroNetwork/",
  "BugReports": "https://github.com/ropensci/dendroNetwork/issues",
  "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libpng-dev\nlibuv1-dev libxml2-dev libssl-dev python3 libzmq3-dev",
  "Repository": "https://ropensci.r-universe.dev",
  "Date/Publication": "2025-08-03 06:21:22 UTC",
  "RemoteUrl": "https://github.com/ropensci/dendroNetwork",
  "RemoteRef": "main",
  "RemoteSha": "51ac08aa8194703a42bdcde875b0950ae49a892a",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-04-15 07:50:30 UTC",
    "User": "root"
  },
  "Author": "Ronald Visser [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-6966-1729>),\nAngelino Salentino [ctb] (ORCID:\n<https://orcid.org/0000-0002-4763-3943>),\nAndy Bunn [ctb] (ORCID: <https://orcid.org/0000-0001-9027-2162>),\nKaija Gahm [rev] (Kaija Gahm reviewed the package for rOpenSci, see\nhttps://github.com/ropensci/software-review/issues/627#issuecomment-1993235710),\nZachary Gajewski [rev] (Zachary Gajewski reviewed the package for\nrOpenSci, see\nhttps://github.com/ropensci/software-review/issues/627#issuecomment-2037644081)",
  "MD5sum": "348d4557e2b99362241db1d7efb62243",
  "_user": "ropensci",
  "_type": "src",
  "_file": "dendroNetwork_0.5.5.tar.gz",
  "_fileid": "423bb164a9684a1d708a62e8960d41e4bef7ec8e0da8f323374185d5e00628c2",
  "_filesize": 1713876,
  "_sha256": "423bb164a9684a1d708a62e8960d41e4bef7ec8e0da8f323374185d5e00628c2",
  "_created": "2026-04-15T07:50:30.000Z",
  "_published": "2026-04-15T07:53:37.742Z",
  "_distro": "noble",
  "_jobs": [
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  "_buildurl": "https://github.com/r-universe/ropensci/actions/runs/24442730189",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/ropensci/dendroNetwork",
  "_commit": {
    "id": "51ac08aa8194703a42bdcde875b0950ae49a892a",
    "author": "RonaldVisser <38214052+RonaldVisser@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Update README.md",
    "time": 1754202082
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  "_maintainer": {
    "name": "Ronald Visser",
    "email": "r.m.visser@saxion.nl",
    "login": "ronaldvisser",
    "mastodon": "@RonaldVisser@akademienl.social",
    "bluesky": "@ronaldvisser.bsky.social",
    "linkedin": "in/ronaldmvisser",
    "orcid": "0000-0001-6966-1729",
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  },
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  "_dependencies": [
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      "package": "dplR",
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      "package": "igraph",
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  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
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  "_tags": [
    {
      "name": "0.5.5",
      "date": "2025-07-25"
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  "_topics": [
    "visualization",
    "graphandnetwork",
    "thirdpartyclient",
    "network",
    "archaeology",
    "dendrochronology",
    "dendroprovenance",
    "network-analysis",
    "tree-rings"
  ],
  "_stars": 7,
  "_contributors": [
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      "uuid": 38214052
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  "_downloads": {
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dendroNetwork"
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  "_devurl": "https://github.com/ropensci/dendronetwork",
  "_pkgdown": "https://docs.ropensci.org/dendroNetwork",
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  "_metadata": {
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  "_rbuild": "4.5.3",
  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
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    "extra/dendroNetwork.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
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    "extra/readme.md",
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  "_homeurl": "https://github.com/ropensci/dendronetwork",
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      "date": "2024-04-30"
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  ],
  "_exports": [
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    "clique_community_names_par",
    "cor_mat_overlap",
    "cyto_clean_styles",
    "cyto_create_cpm_style",
    "cyto_create_gn_style",
    "cyto_create_graph",
    "dendro_network",
    "find_all_cpm_com",
    "gn_names",
    "sim_table",
    "t_value",
    "wuchswerte"
  ],
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    {
      "name": "hol_rom",
      "title": "Roman tree-ring site chronologies from Hollstein",
      "object": "hol_rom",
      "class": [
        "rwl",
        "data.frame"
      ],
      "fields": [
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        "HOL_ALT2H",
        "HOL_BDN2H",
        "HOL_BENGH",
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      ],
      "rows": 1053,
      "table": true,
      "tojson": true
    },
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      "name": "RING_Visser_2021",
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  "_help": [
    {
      "page": "clique_community_names",
      "title": "Clique Percolation Method (with node names)",
      "topics": [
        "clique_community_names"
      ]
    },
    {
      "page": "clique_community_names_par",
      "title": "Clique Percolation Method (with node names)",
      "topics": [
        "clique_community_names_par"
      ]
    },
    {
      "page": "cor_mat_overlap",
      "title": "Pearson correlation matrix",
      "topics": [
        "cor_mat_overlap"
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    },
    {
      "page": "cyto_clean_styles",
      "title": "Cleaning nearly all styles in cytoscape session and import simple styles.",
      "topics": [
        "cyto_clean_styles"
      ]
    },
    {
      "page": "cyto_create_cpm_style",
      "title": "Create CPM style in Cytoscape",
      "topics": [
        "cyto_create_cpm_style"
      ]
    },
    {
      "page": "cyto_create_gn_style",
      "title": "Create Girvan-Newman communities style in Cytoscape",
      "topics": [
        "cyto_create_gn_style"
      ]
    },
    {
      "page": "cyto_create_graph",
      "title": "Create networks in Cytoscape",
      "topics": [
        "cyto_create_graph"
      ]
    },
    {
      "page": "dendro_network",
      "title": "Create dendrochronologial networks",
      "topics": [
        "dendro_network"
      ]
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