{
  "_id": "6a2908c2732311cd875934e9",
  "Package": "dwctaxon",
  "Title": "Edit and Validate Darwin Core Taxon Data",
  "Version": "2.0.4",
  "Authors@R": "c(\nperson(given = \"Joel H.\",\nfamily = \"Nitta\",\nrole = c(\"aut\", \"cre\", \"cph\"),\nemail = \"joelnitta@gmail.com\",\ncomment = c(ORCID = \"0000-0003-4719-7472\")),\nperson(given = \"Wataru\",\nfamily = \"Iwasaki\",\nrole = c(\"ctb\"),\ncomment = c(ORCID = \"0000-0002-9169-9245\")),\nperson(\"Collin\", \"Schwantes\", role = \"rev\",\ncomment = \"Collin reviewed the package (v. 1.0.0.9000) for rOpenSci, see <https://github.com/ropensci/software-review/issues/574>\"),\nperson(\"Stephen\", \"Formel\", role = \"rev\",\ncomment = \"Stephen reviewed the package (v. 1.0.0.9000) for rOpenSci, see <https://github.com/ropensci/software-review/issues/574>\")\n)",
  "Description": "Edit and validate taxonomic data in compliance with Darwin\nCore standards (Darwin Core 'Taxon' class\n<https://dwc.tdwg.org/terms/#taxon>).",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list( markdown = TRUE, roclets = c(\"collate\", \"namespace\",\n\"rd\", \"roxyglobals::global_roclet\"))",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "URL": "https://docs.ropensci.org/dwctaxon/,\nhttps://github.com/ropensci/dwctaxon",
  "BugReports": "https://github.com/ropensci/dwctaxon/issues",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "libicu-dev",
  "Repository": "https://ropensci.r-universe.dev",
  "Date/Publication": "2025-12-15 02:06:47 UTC",
  "RemoteUrl": "https://github.com/ropensci/dwctaxon",
  "RemoteRef": "main",
  "RemoteSha": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-10 06:44:12 UTC",
    "User": "root"
  },
  "Author": "Joel H. Nitta [aut, cre, cph] (ORCID:\n<https://orcid.org/0000-0003-4719-7472>),\nWataru Iwasaki [ctb] (ORCID: <https://orcid.org/0000-0002-9169-9245>),\nCollin Schwantes [rev] (Collin reviewed the package (v. 1.0.0.9000) for\nrOpenSci, see\n<https://github.com/ropensci/software-review/issues/574>),\nStephen Formel [rev] (Stephen reviewed the package (v. 1.0.0.9000) for\nrOpenSci, see\n<https://github.com/ropensci/software-review/issues/574>)",
  "Maintainer": "Joel H. Nitta <joelnitta@gmail.com>",
  "MD5sum": "3b149c8af465c2b9676df6a3466a70b6",
  "_user": "ropensci",
  "_type": "src",
  "_file": "dwctaxon_2.0.4.tar.gz",
  "_fileid": "d26d0d26a2c7849038e379c5b22f1c0512f6f951246a9f08562281707e4d60ed",
  "_filesize": 1882531,
  "_sha256": "d26d0d26a2c7849038e379c5b22f1c0512f6f951246a9f08562281707e4d60ed",
  "_created": "2026-06-10T06:44:12.000Z",
  "_published": "2026-06-10T06:48:34.449Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 80498016238,
      "time": 142,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7528438421"
    },
    {
      "job": 80498016237,
      "time": 154,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7528442051"
    },
    {
      "job": 80498016225,
      "time": 112,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7528446620"
    },
    {
      "job": 80498016248,
      "time": 114,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7528459998"
    },
    {
      "job": 80497513955,
      "time": 182,
      "config": "pkgdown",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7528392694"
    },
    {
      "job": 80497513931,
      "time": 201,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7528397549"
    },
    {
      "job": 80498016254,
      "time": 127,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7528433702"
    },
    {
      "job": 80498016245,
      "time": 125,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7528433405"
    },
    {
      "job": 80498016236,
      "time": 95,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7528424070"
    },
    {
      "job": 80498016240,
      "time": 78,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7528419378"
    }
  ],
  "_buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/ropensci/dwctaxon",
  "_commit": {
    "id": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
    "author": "joelnitta <joelnitta@gmail.com>",
    "committer": "joelnitta <joelnitta@gmail.com>",
    "message": "Update cran-comments and bump ver\n",
    "time": 1765764407
  },
  "_maintainer": {
    "name": "Joel H. Nitta",
    "email": "joelnitta@gmail.com",
    "login": "joelnitta",
    "mastodon": "@joelnitta@fosstodon.org",
    "bluesky": "@joelnitta.com",
    "orcid": "0000-0003-4719-7472",
    "description": "Associate Professor at Chiba University, Japan",
    "uuid": 13459362
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2.0",
      "role": "Depends"
    },
    {
      "package": "assertthat",
      "role": "Imports"
    },
    {
      "package": "digest",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "glue",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "settings",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "mockery",
      "role": "Suggests"
    },
    {
      "package": "readr",
      "role": "Suggests"
    },
    {
      "package": "usethis",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "patrick",
      "role": "Suggests"
    },
    {
      "package": "stringi",
      "role": "Suggests"
    },
    {
      "package": "english",
      "role": "Suggests"
    },
    {
      "package": "tidyr",
      "role": "Suggests"
    },
    {
      "package": "utils",
      "role": "Suggests"
    },
    {
      "package": "curl",
      "role": "Suggests"
    },
    {
      "package": "httr",
      "role": "Suggests"
    }
  ],
  "_owner": "ropensci",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-50",
      "n": 9
    },
    {
      "week": "2025-51",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "v2.0.3.9001",
      "date": "2025-12-10"
    }
  ],
  "_topics": [
    "database"
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "joelnitta",
      "count": 278,
      "uuid": 13459362
    }
  ],
  "_userbio": {
    "uuid": 1200269,
    "type": "organization",
    "name": "rOpenSci",
    "description": "Tools and R Packages for Open Science"
  },
  "_downloads": {
    "count": 185,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dwctaxon"
  },
  "_devurl": "https://github.com/ropensci/dwctaxon",
  "_pkgdown": "https://docs.ropensci.org/dwctaxon/",
  "_searchresults": 33,
  "_metadata": {
    "review": {
      "id": 574,
      "status": "reviewed",
      "version": "1.0.0.9000",
      "organization": "rOpenSci Software Review",
      "url": "https://github.com/ropensci/software-review/issues/574"
    },
    "ropensci_category": "taxonomy"
  },
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/dwctaxon.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/ropensci/dwctaxon",
  "_realowner": "ropensci",
  "_cranurl": true,
  "_releases": [
    {
      "version": "2.0.2",
      "date": "2023-05-30"
    },
    {
      "version": "2.0.3",
      "date": "2023-12-13"
    },
    {
      "version": "2.0.4",
      "date": "2025-12-15"
    }
  ],
  "_exports": [
    "dct_add_row",
    "dct_check_mapping",
    "dct_check_sci_name",
    "dct_check_tax_status",
    "dct_check_taxon_id",
    "dct_drop_row",
    "dct_fill_col",
    "dct_modify_row",
    "dct_options",
    "dct_validate"
  ],
  "_datasets": [
    {
      "name": "dct_filmies",
      "title": "Taxonomic data of filmy ferns",
      "object": "dct_filmies",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "taxonID",
        "acceptedNameUsageID",
        "taxonomicStatus",
        "taxonRank",
        "scientificName"
      ],
      "rows": 2451,
      "table": true,
      "tojson": true
    },
    {
      "name": "dct_terms",
      "title": "Darwin Core Taxon terms",
      "object": "dct_terms",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "group",
        "term"
      ],
      "rows": 47,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "dct_add_row",
      "title": "Add row(s) to a taxonomic database",
      "topics": [
        "dct_add_row"
      ]
    },
    {
      "page": "dct_check_mapping",
      "title": "Check mapping of usage taxonomic IDs",
      "topics": [
        "dct_check_mapping"
      ]
    },
    {
      "page": "dct_check_sci_name",
      "title": "Check scientificName",
      "topics": [
        "dct_check_sci_name"
      ]
    },
    {
      "page": "dct_check_tax_status",
      "title": "Check that taxonomicStatus is within valid values in Darwin Core taxonomic data",
      "topics": [
        "dct_check_tax_status"
      ]
    },
    {
      "page": "dct_check_taxon_id",
      "title": "Check taxonID",
      "topics": [
        "dct_check_taxon_id"
      ]
    },
    {
      "page": "dct_drop_row",
      "title": "Drop row(s) of a taxonomic database",
      "topics": [
        "dct_drop_row"
      ]
    },
    {
      "page": "dct_fill_col",
      "title": "Fill a column of a taxonomic database",
      "topics": [
        "dct_fill_col"
      ]
    },
    {
      "page": "dct_filmies",
      "title": "Taxonomic data of filmy ferns",
      "topics": [
        "dct_filmies"
      ]
    },
    {
      "page": "dct_modify_row",
      "title": "Modify row(s) of a taxonomic database",
      "topics": [
        "dct_modify_row"
      ]
    },
    {
      "page": "dct_options",
      "title": "Get and set function arguments via options",
      "topics": [
        "dct_options"
      ]
    },
    {
      "page": "dct_terms",
      "title": "Darwin Core Taxon terms",
      "topics": [
        "dct_terms"
      ]
    },
    {
      "page": "dct_validate",
      "title": "Validate a taxonomic database",
      "topics": [
        "dct_validate"
      ]
    }
  ],
  "_pkglogo": "https://github.com/ropensci/dwctaxon/raw/main/man/figures/logo.png",
  "_readme": "https://github.com/ropensci/dwctaxon/raw/main/README.md",
  "_rundeps": [
    "assertthat",
    "cli",
    "digest",
    "dplyr",
    "generics",
    "glue",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "rlang",
    "settings",
    "stringi",
    "stringr",
    "tibble",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "editing.Rmd",
      "filename": "editing.html",
      "title": "Editing DwC taxon data",
      "engine": "knitr::rmarkdown",
      "headings": [
        "The data",
        "Adding rows",
        "Adding rows by vector",
        "Adding rows by dataframe",
        "Deleting rows",
        "Modifying rows",
        "Identifying rows to modify",
        "Automatic re-mapping of synonyms",
        "Filling columns"
      ],
      "created": "2022-11-16 05:29:57",
      "modified": "2023-05-29 23:41:08",
      "commits": 9
    },
    {
      "source": "real-data.Rmd",
      "filename": "real-data.html",
      "title": "Real World Example",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Import data",
        "Validation",
        "Investigate errors",
        "Duplicate names",
        "Invalid column names",
        "Fixing the data",
        "Summary"
      ],
      "created": "2023-05-03 21:14:40",
      "modified": "2025-12-10 06:11:33",
      "commits": 8
    },
    {
      "source": "validation.Rmd",
      "filename": "validation.html",
      "title": "Validating DwC taxon data",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "The data",
        "Error on failure",
        "Summary on failure",
        "Checks",
        "Controlled vocabularies",
        "Changing the defaults"
      ],
      "created": "2022-11-16 05:29:57",
      "modified": "2023-05-29 23:41:08",
      "commits": 12
    },
    {
      "source": "what-is-dwc.Rmd",
      "filename": "what-is-dwc.html",
      "title": "What is DwC?",
      "engine": "knitr::rmarkdown",
      "headings": [
        "DwC is a standard for biodiversity data",
        "Features of the DwC taxon format",
        "Vertically oriented",
        "Machine and human friendly",
        "Extensible"
      ],
      "created": "2022-11-16 05:29:57",
      "modified": "2023-05-29 23:41:08",
      "commits": 9
    }
  ],
  "_score": 6.074816440645175,
  "_indexed": true,
  "_nocasepkg": "dwctaxon",
  "_universes": [
    "ropensci",
    "joelnitta"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.0.4",
      "date": "2026-06-10T06:46:27.000Z",
      "distro": "noble",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "d698ff29c8b1c359bbe60720d5b6ef3ac83c7b664801d1c19bf54a78c2bd0f3f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.0.4",
      "date": "2026-06-10T06:46:37.000Z",
      "distro": "noble",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "3de3439d592845562a9327c55ebbb599c287583ad0da28811c074e288476a846",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.0.4",
      "date": "2026-06-10T06:47:00.000Z",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "e9729bf0d0bc88b06b93dff41cedd2d75daac306ac16cb6b8c02bae543bc82ed",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.0.4",
      "date": "2026-06-10T06:47:47.000Z",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "cc7388083c85faf246cc68e06bc1c8d833b17f59bd54d568cf61ec0bd25a4e13",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.0.4",
      "date": "2026-06-10T06:46:33.000Z",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "42fdb8bc245bee2fd55f80e7f913473892fc6c4131dc1be8214dd41af27ecf8f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2.0.4",
      "date": "2026-06-10T06:46:01.000Z",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "6c4526520156e03ff84a9aea8614b6f7d3c478ef4a7ada583cb49997d7006470",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2.0.4",
      "date": "2026-06-10T06:45:32.000Z",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "2d7242cd7e25c959b92848d477383e46ee432c71b4298afd7803262771f05bea",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2.0.4",
      "date": "2026-06-10T06:45:21.000Z",
      "commit": "dbd42450af0ddc868f364909ee8e97fdf877dacc",
      "fileid": "7b621b03a7b5d1b2135f782f1d66a310384608296090de1322eb99c6cb0ce813",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ropensci/actions/runs/27258243777"
    }
  ]
}