{ "_id": "69e70bafc5259ad4cd9c2d91", "Type": "Package", "Package": "phylotaR", "Title": "Automated Phylogenetic Sequence Cluster Identification from\n'GenBank'", "Version": "1.3.0", "Authors@R": "c(\nperson(\"Shixiang\", \"Wang\", , \"w_shixiang@163.com\", role = c(\"aut\", \"cre\")),\nperson(\"Hannes\", \"Hettling\", role = \"aut\"),\nperson(\"Rutger\", \"Vos\", role = \"aut\"),\nperson(\"Alexander\", \"Zizka\", role = \"aut\"),\nperson(\"Dom\", \"Bennett\", role = \"aut\"),\nperson(\"Alexandre\", \"Antonelli\", role = \"aut\")\n)", "Description": "A pipeline for the identification, within taxonomic\ngroups, of orthologous sequence clusters from 'GenBank'\n as the first step in a\nphylogenetic analysis. The pipeline depends on a local\nalignment search tool and is, therefore, not dependent on\ndifferences in gene naming conventions and naming errors.", "License": "MIT + file LICENSE", "URL": "https://docs.ropensci.org/phylotaR/,\nhttps://github.com/ropensci/phylotaR#readme", "BugReports": "https://github.com/ropensci/phylotaR/issues", "VignetteBuilder": "knitr", "Encoding": "UTF-8", "RoxygenNote": "7.3.1", "SystemRequirements": "BLAST+ (>=2.0)", "Config/pak/sysreqs": "cmake libfontconfig1-dev libfreetype6-dev\nlibfribidi-dev libglpk-dev make libharfbuzz-dev libicu-dev\nlibjpeg-dev libpng-dev libuv1-dev libxml2-dev libssl-dev\nxz-utils", "Repository": "https://ropensci.r-universe.dev", "Date/Publication": "2026-03-20 03:14:09 UTC", "RemoteUrl": "https://github.com/ropensci/phylotaR", "RemoteRef": "master", "RemoteSha": "648d5733c8f44213238726f7110dca8874023490", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-04-19 08:50:19 UTC", "User": "root" }, "Author": "Shixiang Wang [aut, 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