# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "gtexr" in publications use:' type: software license: MIT title: 'gtexr: Query the GTEx Portal API' version: 0.2.0.9001 identifiers: - type: doi value: 10.32614/CRAN.package.gtexr abstract: A convenient R interface to the Genotype-Tissue Expression (GTEx) Portal API. The GTEx project is a comprehensive public resource for studying tissue-specific gene expression and regulation in human tissues. Through systematic analysis of RNA sequencing data from 54 non-diseased tissue sites across nearly 1000 individuals, GTEx provides crucial insights into the relationship between genetic variation and gene expression. This data is accessible through the GTEx Portal API enabling programmatic access to human gene expression data. For more information on the API, see . authors: - family-names: Warwick given-names: Alasdair email: alasdair.warwick.19@ucl.ac.uk orcid: https://orcid.org/0000-0002-0800-2890 - family-names: Zuckerman given-names: Benjamin orcid: https://orcid.org/0000-0002-0077-6074 - family-names: Olvera-Barrios given-names: Abraham orcid: https://orcid.org/0000-0002-3305-4465 - family-names: Ung given-names: Chuin Ying orcid: https://orcid.org/0000-0001-8487-4589 - family-names: Luben given-names: Robert orcid: https://orcid.org/0000-0002-5088-6343 preferred-citation: type: manual title: Query the GTEx Portal API authors: - family-names: Warwick given-names: Alasdair email: alasdair.warwick.19@ucl.ac.uk orcid: https://orcid.org/0000-0002-0800-2890 - family-names: Zuckerman given-names: Benjamin orcid: https://orcid.org/0000-0002-0077-6074 - family-names: Olvera-Barrios given-names: Abraham orcid: https://orcid.org/0000-0002-3305-4465 - family-names: Ung given-names: Chuin Ying orcid: https://orcid.org/0000-0001-8487-4589 - family-names: Luben given-names: Robert orcid: https://orcid.org/0000-0002-5088-6343 year: '2024' url: https://github.com/ropensci/gtexr repository: https://ropensci.r-universe.dev repository-code: https://github.com/ropensci/gtexr commit: 1e4c677c405290ba6357a45898735248a4680a0e url: https://docs.ropensci.org/gtexr/ contact: - family-names: Warwick given-names: Alasdair email: alasdair.warwick.19@ucl.ac.uk orcid: https://orcid.org/0000-0002-0800-2890 references: - type: article title: The Genotype-Tissue Expression (GTEx) project authors: - family-names: Lonsdale given-names: John - family-names: Thomas given-names: Jeffrey - family-names: Salvatore given-names: Mike - family-names: Phillips given-names: Rebecca - family-names: Lo given-names: Edmund - family-names: Shad given-names: Saboor - family-names: Hasz given-names: Richard - family-names: Walters given-names: Gary - family-names: Garcia given-names: Fernando - family-names: Young given-names: Nancy - family-names: Foster given-names: Barbara - family-names: Moser given-names: Mike - family-names: Karasik given-names: Ellen - family-names: Gillard given-names: Bryan - family-names: Ramsey given-names: Kimberley - family-names: Sullivan given-names: Susan - family-names: Bridge given-names: Jason - family-names: Magazine given-names: Harold - family-names: Syron given-names: John - family-names: Fleming given-names: Johnelle - family-names: Siminoff given-names: Laura - family-names: Traino given-names: Heather - family-names: Mosavel given-names: Maghboeba - family-names: Barker given-names: Laura - family-names: Jewell given-names: Scott - family-names: Rohrer given-names: Dan - family-names: Maxim given-names: Dan - family-names: Filkins given-names: Dana - family-names: Harbach given-names: Philip - family-names: Cortadillo given-names: Eddie - family-names: Berghuis given-names: Bree - family-names: Turner given-names: Lisa - family-names: Hudson given-names: Eric - family-names: Feenstra given-names: Kristin - family-names: Sobin given-names: Leslie - family-names: Robb given-names: James - family-names: Branton given-names: Phillip - family-names: Korzeniewski given-names: Greg - family-names: Shive given-names: Charles - family-names: Tabor given-names: David - family-names: Qi given-names: Liqun - family-names: Groch given-names: Kevin - family-names: Nampally given-names: Sreenath - family-names: Buia given-names: Steve - family-names: Zimmerman given-names: Angela - family-names: Smith given-names: Anna - family-names: Burges given-names: Robin - family-names: Robinson given-names: Karna - family-names: Valentino given-names: Kim - family-names: Bradbury given-names: Deborah - family-names: Cosentino given-names: Mark - family-names: Diaz-Mayoral given-names: Norma - family-names: Kennedy given-names: Mary - family-names: Engel given-names: Theresa - family-names: Williams given-names: Penelope - family-names: Erickson given-names: Kenyon - family-names: Ardlie given-names: Kristin - family-names: Winckler given-names: Wendy - family-names: Getz given-names: Gad - family-names: DeLuca given-names: David - family-names: MacArthur given-names: Daniel - family-names: Kellis given-names: Manolis - family-names: Thomson given-names: Alexander - family-names: Young given-names: Taylor - family-names: Gelfand given-names: Ellen - family-names: Donovan given-names: Molly - family-names: Meng given-names: Yan - family-names: Grant given-names: George - family-names: Mash given-names: Deborah - family-names: Marcus given-names: Yvonne - family-names: Basile given-names: Margaret - family-names: Liu given-names: Jun - family-names: Zhu given-names: Jun - family-names: Tu given-names: Zhidong - family-names: Cox given-names: Nancy J - family-names: Nicolae given-names: Dan L - family-names: Gamazon given-names: Eric R - family-names: Im given-names: Hae Kyung - family-names: Konkashbaev given-names: Anuar - family-names: Pritchard given-names: Jonathan - family-names: Stevens given-names: Matthew - family-names: Flutre given-names: Timothèe - family-names: Wen given-names: Xiaoquan - family-names: Dermitzakis given-names: Emmanouil T - family-names: Lappalainen given-names: Tuuli - family-names: Guigo given-names: Roderic - family-names: Monlong given-names: Jean - family-names: Sammeth given-names: Michael - family-names: Koller given-names: Daphne - family-names: Battle given-names: Alexis - family-names: Mostafavi given-names: Sara - family-names: McCarthy given-names: Mark - family-names: Rivas given-names: Manual - family-names: Maller given-names: Julian - family-names: Rusyn given-names: Ivan - family-names: Nobel given-names: Andrew - family-names: Wright given-names: Fred - family-names: Shabalin given-names: Andrey - family-names: Feolo given-names: Mike - family-names: Sharopova given-names: Nataliya - family-names: Sturcke given-names: Anne - family-names: Paschal given-names: Justin - family-names: Anderson given-names: James M - family-names: Wilder given-names: Elizabeth L - family-names: Derr given-names: Leslie K - family-names: Green given-names: Eric D - family-names: Struewing given-names: Jeffery P - family-names: Temple given-names: Gary - family-names: Volpi given-names: Simona - family-names: Boyer given-names: Joy T - family-names: Thomson given-names: Elizabeth J - family-names: Guyer given-names: Mark S - family-names: Ng given-names: Cathy - family-names: Abdallah given-names: Assya - family-names: Colantuoni given-names: Deborah - family-names: Insel given-names: Thomas R - family-names: Koester given-names: Susan E - family-names: Little given-names: A Roger - family-names: Bender given-names: Patrick K - family-names: Lehner given-names: Thomas - family-names: Yao given-names: Yin - family-names: Compton given-names: Carolyn C - family-names: Vaught given-names: Jimmie B - family-names: Sawyer given-names: Sherilyn - family-names: Lockhart given-names: Nicole C - family-names: Demchok given-names: Joanne - family-names: Moore given-names: Helen F journal: Nature Genetics year: '2013' volume: '45' issue: '6' doi: 10.1038/ng.2653 start: 580-585