Package: birdsize 0.0.0.9000
Renata Diaz
birdsize: Estimate Avian Body Size Distributions
Generate estimated body size distributions for populations or communities of birds, given either species ID or species' mean body size. Designed to work naturally with the North American Breeding Bird Survey, or with any dataset of bird species, abundance, and/or mean size data.
Authors:
birdsize_0.0.0.9000.tar.gz
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birdsize.pdf |birdsize.html✨
birdsize/json (API)
NEWS
| # Install 'birdsize' in R: |
| install.packages('birdsize', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org')) |
Reviews:rOpenSci Software Review #577
Bug tracker:https://github.com/diazrenata/birdsize/issues
- demo_route_clean - Cleaned data for a hypothetical Breeding Bird Survey route.
- demo_route_raw - Raw data for a hypothetical Breeding Bird Survey route.
- known_species - List of species known to 'birdsize'
- toy_aou_community - Toy data frame of abundances and AOUs
- toy_size_community - Toy data frame of abundances and species mean sizes
- toy_species_name_community - Toy data frame of abundances and species names
Last updated 2 years ago from:78d7840018 (on main). Checks:7 NOTE, 4 OK. Indexed: yes.
| Target | Result | Total time | Artifact |
|---|---|---|---|
| linux-devel-x86_64 | NOTE | 119 | |
| pkgdown docs | OK | 156 | |
| source / vignettes | OK | 158 | |
| linux-release-x86_64 | NOTE | 116 | |
| macos-release-arm64 | NOTE | 88 | |
| macos-oldrel-arm64 | NOTE | 90 | |
| windows-devel | NOTE | 89 | |
| windows-release | NOTE | 82 | |
| windows-oldrel | NOTE | 85 | |
| wasm-release | OK | 113 | |
| wasm-oldrel | OK | 99 |
Exports:community_generatefilter_bbs_surveyindividual_metabolic_ratepop_generatespecies_definespecies_lookup
Dependencies:truncnorm
bbs-data
Rendered frombbs-data.Rmdusingknitr::rmarkdownon Jun 28 2025.Last update: 2023-11-20
Started: 2022-11-02
birdsize
Rendered frombirdsize.Rmdusingknitr::rmarkdownon Jun 28 2025.Last update: 2023-11-20
Started: 2022-11-02
scaling
Rendered fromscaling.Rmdusingknitr::rmarkdownon Jun 28 2025.Last update: 2023-11-20
Started: 2022-12-15
species
Rendered fromspecies.Rmdusingknitr::rmarkdownon Jun 28 2025.Last update: 2023-11-20
Started: 2022-12-12
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Simulate individual measurements for many populations | community_generate |
| Cleaned data for a hypothetical Breeding Bird Survey route. | demo_route_clean |
| Raw data for a hypothetical Breeding Bird Survey route. | demo_route_raw |
| Clean raw Breeding Bird Survey survey data | filter_bbs_survey |
| Estimate individual-level BMR | individual_metabolic_rate |
| List of species known to 'birdsize' | known_species |
| Simulate body masses for a population | pop_generate |
| Define a species | species_define |
| Species lookup | species_lookup |
| Toy data frame of abundances and AOUs (for vignettes) | toy_aou_community |
| Toy data frame of abundances and species mean sizes (for vignettes) | toy_size_community |
| Toy data frame of abundances and species names (for vignettes) | toy_species_name_community |
