Package: hdcuremodels 0.0.5
hdcuremodels: High-Dimensional Cure Models
Provides functions for fitting various penalized parametric and semi-parametric mixture cure models with different penalty functions, testing for a significant cure fraction, and testing for sufficient follow-up as described in Fu et al (2022)<doi:10.1002/sim.9513> and Archer et al (2024)<doi:10.1186/s13045-024-01553-6>. False discovery rate controlled variable selection is provided using model-X knock-offs.
Authors:
hdcuremodels_0.0.5.tar.gz
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hdcuremodels.pdf |hdcuremodels.html✨
hdcuremodels/json (API)
# Install 'hdcuremodels' in R: |
install.packages('hdcuremodels', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org')) |
Reviews:rOpenSci Software Review #692
Bug tracker:https://github.com/kelliejarcher/hdcuremodels/issues
Last updated from:2253468146 (on main). Checks:1 ERROR, 9 OK. Indexed: yes.
Target | Result | Total time | Artifact |
---|---|---|---|
linux-devel-x86_64 | ERROR | 296 | |
pkgdown docs | OK | 256 | |
source / vignettes | OK | 354 | |
linux-release-x86_64 | OK | 374 | |
macos-release-arm64 | OK | 307 | |
macos-oldrel-arm64 | OK | 270 | |
windows-devel | OK | 386 | |
windows-release | OK | 452 | |
windows-oldrel | OK | 439 | |
wasm-release | OK | 159 |
Exports:auc_mcmconcordance_mcmcure_estimatecureemcuregmifscv_cureemcv_curegmifsgenerate_cure_datanonzerocure_testsufficient_fu_test
Dependencies:abindassertthatbackportsbbmlebdsmatrixBHbootbroomcarcarDataclicodetoolscorpcorcorrplotcowplotcpp11data.tableDerivdeSolvedoBydoParalleldplyrfarverfastGHQuadflexsurvflexsurvcureforeachFormulagenericsggplot2ggpubrggrepelggsciggsignifglmnetgluegridExtragtablegtoolsisobanditeratorsknockofflabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrmstatemuhazmvnfastmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigplyrpolynompurrrquadprogquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackRdsdpreformulasrlangRSpectrarstatixrstpm2S7scalesshapeSparseMstatmodstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithr