Package: ijtiff 2.3.4

Rory Nolan

ijtiff: Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files

General purpose TIFF file I/O for R users. Currently the only such package with read and write support for TIFF files with floating point (real-numbered) pixels, and the only package that can correctly import TIFF files that were saved from 'ImageJ' and write TIFF files than can be correctly read by 'ImageJ' <https://imagej.net/ij/>. Also supports text image I/O.

Authors:Rory Nolan [aut, cre], Kent Johnson [aut], Simon Urbanek [ctb], Sergi Padilla-Parra [ths], Jeroen Ooms [rev, ctb], Jon Clayden [rev]

ijtiff_2.3.4.tar.gz
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ijtiff_2.3.4.tgz(r-4.4-x86_64)ijtiff_2.3.4.tgz(r-4.4-arm64)ijtiff_2.3.4.tgz(r-4.3-x86_64)ijtiff_2.3.4.tgz(r-4.3-arm64)
ijtiff_2.3.4.tar.gz(r-4.5-noble)ijtiff_2.3.4.tar.gz(r-4.4-noble)
ijtiff_2.3.4.tgz(r-4.4-emscripten)ijtiff_2.3.4.tgz(r-4.3-emscripten)
ijtiff.pdf |ijtiff.html
ijtiff/json (API)
NEWS

# Install 'ijtiff' in R:
install.packages('ijtiff', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/ijtiff/issues

Uses libs:
  • tiff– Tag Image File Format (TIFF) library

On CRAN:

image-manipulationimagejpeer-reviewedtiff-filestiff-images

19 exports 18 stars 8.23 score 35 dependencies 7 dependents 1 mentions 33 scripts 961 downloads

Last updated 10 months agofrom:85bab51063 (on master). Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 26 2024
R-4.5-win-x86_64OKSep 26 2024
R-4.5-linux-x86_64OKSep 26 2024
R-4.4-win-x86_64OKSep 26 2024
R-4.4-mac-x86_64OKSep 26 2024
R-4.4-mac-aarch64OKSep 26 2024
R-4.3-win-x86_64OKSep 26 2024
R-4.3-mac-x86_64OKSep 26 2024
R-4.3-mac-aarch64OKSep 26 2024

Exports:as_EBImageas_ijtiff_imgcount_framesdisplayframes_countijtiff_imglinescan_to_stackread_tagsread_tifread_txt_imgstack_to_linescantags_readtif_readtif_tags_referencetif_writetxt_img_readtxt_img_writewrite_tifwrite_txt_img

Dependencies:backportsbitbit64checkmateclicliprcpp11crayondplyrfansifsgenericsgluehmslifecyclemagrittrpillarpkgconfigprettyunitsprogresspurrrR6readrrlangstrexstringistringrtibbletidyselecttzdbutf8vctrsvroomwithrzeallot

Reading and Writing Images

Rendered fromreading-and-writing-images.Rmdusingknitr::rmarkdownon Sep 26 2024.

Last update: 2020-07-27
Started: 2018-09-05

Text Images

Rendered fromtext-images.Rmdusingknitr::rmarkdownon Sep 26 2024.

Last update: 2018-09-05
Started: 2018-09-05

The ImageJ Problem

Rendered fromthe-imagej-problem.Rmdusingknitr::rmarkdownon Sep 26 2024.

Last update: 2023-12-13
Started: 2018-09-05

Readme and manuals

Help Manual

Help pageTopics
Convert an ijtiff_img to an EBImage::Image.as_EBImage
Count the number of frames in a TIFF file.count_frames frames_count
Basic image display.display
'ijtiff': TIFF I/O for _ImageJ_ usersijtiff-package ijtiff
'ijtiff_img' class.as_ijtiff_img ijtiff_img
Rejig linescan images.linescan-conversion linescan_to_stack stack_to_linescan
Print method for an 'ijtiff_img'.print.ijtiff_img
Read TIFF tag information without actually reading the image array.read_tags tags_read
Read an image stored in the TIFF formatread_tif tif_read
Read/write an image array to/from disk as text file(s).read_txt_img text-image-io txt_img_read txt_img_write write_txt_img
TIFF tag reference.tif_tags_reference
Write images in TIFF formattif_write write_tif