Package: occCite 0.6.0

Hannah L. Owens

occCite: Querying and Managing Large Biodiversity Occurrence Datasets

Facilitates the gathering of biodiversity occurrence data from disparate sources. Metadata is managed throughout the process to facilitate reporting and enhanced ability to repeat analyses.

Authors:Hannah L. Owens [aut, cre], Cory Merow [aut], Brian Maitner [aut], Jamie M. Kass [aut], Vijay Barve [aut], Robert P. Guralnick [aut], Damiano Oldoni [rev]

occCite_0.6.0.tar.gz
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occCite.pdf |occCite.html
occCite/json (API)
NEWS

# Install 'occCite' in R:
install.packages('occCite', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #407

Bug tracker:https://github.com/ropensci/occcite/issues

Pkgdown site:https://docs.ropensci.org

Datasets:

On CRAN:

Conda:

biodiversity-databiodiversity-informaticsbiodiversity-standardscitationsmuseum-collection-specimensmuseum-collectionsmuseum-metadata

7.46 score 23 stars 50 scripts 447 downloads 11 exports 116 dependencies

Last updated 1 months ago from:630f44c2d4 (on main). Checks:9 OK, 2 NOTE. Indexed: yes.

TargetResultTotal timeArtifact
linux-devel-x86_64OK200
pkgdown docsOK324
source / vignettesOK305
linux-release-x86_64OK222
macos-release-arm64OK130
macos-oldrel-arm64NOTE133
windows-develOK178
windows-releaseOK142
windows-oldrelNOTE243
wasm-releaseOK174
wasm-oldrelOK225

Exports:GBIFLoginGBIFLoginManagergetBIENpointsgetGBIFpointsoccCitationoccCiteDataoccCiteMapoccQueryprevGBIFdownloadstudyTaxonListtaxonRectification

Dependencies:apeaskpassbackportsbase64encbib2dfbibtexBIENbslibcachemclassclassIntclicodetoolscpp11crosstalkcrulcurldata.tableDBIdigestdoParalleldplyrDTe1071evaluateextrafontextrafontdbfarverfastmapfontawesomeforeachfsgenericsggplot2gluegridExtragtablehighrhtmltoolshtmlwidgetshttpcodehttpuvhttrhumaniformatisobanditeratorsjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevalleafletleaflet.providerslifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimenlmeoaiopensslpillarpkgconfigplyrpngpromisesproxypurrrR.methodsS3R.ooR.utilsR6rappdirsrasterRColorBrewerRcppRefManageRrgbifrlangrmarkdownRPostgreSQLRttf2pt1s2sassscalessfspstringistringrsysterratibbletidyrtidyselecttimechangetinytextriebeardunitsurltoolsutf8vctrsviridisviridisLitewafflewhiskerwithrwkxfunxml2yaml

Advanced search and citation of occurrences

Rendered fromb_Advanced.Rmdusingknitr::rmarkdownon Jul 08 2025.

Last update: 2022-03-15
Started: 2022-03-01

Simple search and citation of occurrences

Rendered froma_Simple.Rmdusingknitr::rmarkdownon Jul 08 2025.

Last update: 2024-10-28
Started: 2022-03-01