Package: ohun 1.0.2

Marcelo Araya-Salas

ohun: Optimizing Acoustic Signal Detection

Facilitates the automatic detection of acoustic signals, providing functions to diagnose and optimize the performance of detection routines. Detections from other software can also be explored and optimized. This package has been peer-reviewed by rOpenSci. Araya-Salas et al. (2022) <doi:10.1101/2022.12.13.520253>.

Authors:Marcelo Araya-Salas [aut, cre], Alec L. Robitaille [rev], Sam Lapp [rev]

ohun_1.0.2.tar.gz
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ohun_1.0.2.tgz(r-4.4-any)ohun_1.0.2.tgz(r-4.3-any)
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ohun.pdf |ohun.html✨
ohun/json (API)
NEWS

# Install 'ohun' in R:
install.packages('ohun', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/ohun/issues

Datasets:
  • lbh1 - Long-billed hermit recording
  • lbh2 - Long-billed hermit recording
  • lbh_reference - Example data frame of a selection table including all sound events of interests

On CRAN:

audio-processingbioacousticssound-event-detectionspectrogramstreamline-analysis

20 exports 12 stars 6.81 score 84 dependencies 1 dependents 20 scripts 442 downloads

Last updated 18 days agofrom:7f495a7b95 (on master). Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 27 2024
R-4.5-winOKSep 27 2024
R-4.5-linuxOKSep 27 2024
R-4.4-winOKSep 27 2024
R-4.4-macOKSep 27 2024
R-4.3-winOKSep 27 2024
R-4.3-macOKSep 27 2024

Exports:consensus_detectiondiagnose_detectionenergy_detectorfeature_acoustic_datafeature_referencefilter_detectionget_envelopesget_templateslabel_detectionlabel_spectromerge_overlapsoptimize_energy_detectoroptimize_template_detectorplot_detectionsplit_acoustic_datasummarize_acoustic_datasummarize_diagnosticsummarize_referencetemplate_correlatortemplate_detector

Dependencies:backportsbase64encbioacousticsbitopsbriocallrcheckmateclassclassIntclicolorspacecpp11crayonDBIdescdiffobjdigestdtwe1071evaluatefansifarverfastmapfftwfsggplot2gluegtablehighrhtmltoolsigraphisobandjsonliteKernSmoothknitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmomentsmonitoRmunsellNatureSoundsnlmepbapplypillarpkgbuildpkgconfigpkgloadpraiseprocessxproxypsR6RColorBrewerRcppRCurlrematch2rjsonrlangrprojroots2scalesseewavesfsignalstringistringrtestthattibbletuneRunitsutf8vctrsviridisLitewaldowarbleRwithrwkxfunyaml

Optimizing sound event detection

Marcelo Araya-Salas, PhD

Rendered fromintro_to_ohun.Rmdusingknitr::rmarkdownon Sep 27 2024.

Last update: 2023-11-13
Started: 2023-06-09

Template-based detection

Marcelo Araya-Salas, PhD

Rendered fromtemplate_based_detection.Rmdusingknitr::rmarkdownon Sep 27 2024.

Last update: 2023-11-13
Started: 2023-06-05

Energy-based detection

Marcelo Araya-Salas, PhD

Rendered fromenergy_based_detection.Rmdusingknitr::rmarkdownon Sep 27 2024.

Last update: 2024-07-22
Started: 2023-06-05