Package: rentrez 1.2.4

Indraneel Chakraborty

rentrez: 'Entrez' in R

Provides an R interface to the NCBI's 'EUtils' API, allowing users to search databases like 'GenBank' <https://www.ncbi.nlm.nih.gov/genbank/> and 'PubMed' <https://pubmed.ncbi.nlm.nih.gov/>, process the results of those searches and pull data into their R sessions.

Authors:David Winter [aut], Scott Chamberlain [ctb], Han Guangchun [ctb], Indraneel Chakraborty [aut, cre]

rentrez_1.2.4.tar.gz
rentrez_1.2.4.zip(r-4.7)rentrez_1.2.4.zip(r-4.6)rentrez_1.2.4.zip(r-4.5)
rentrez_1.2.4.tgz(r-4.6-any)rentrez_1.2.4.tgz(r-4.5-any)
rentrez_1.2.4.tar.gz(r-4.7-any)rentrez_1.2.4.tar.gz(r-4.6-any)
rentrez_1.2.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
rentrez/json (API)

# Install 'rentrez' in R:
install.packages('rentrez', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ropensci/rentrez/issues

Pkgdown/docs site:https://docs.ropensci.org

On CRAN:

Conda:

14.73 score 218 stars 93 packages 1.4k scripts 43k downloads 36 mentions 16 exports 9 dependencies

Last updated from:1dbd57c42e (on master). Checks:8 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK126
pkgdown docsOK151
source / vignettesOK215
macos-oldrel-arm64OK81
windows-develOK80
windows-releaseOK75
windows-oldrelOK67
wasm-releaseOK105

Exports:entrez_citmatchentrez_db_linksentrez_db_searchableentrez_db_summaryentrez_dbsentrez_fetchentrez_global_queryentrez_infoentrez_linkentrez_postentrez_searchentrez_summaryextract_from_esummarylinkout_urlsparse_pubmed_xmlset_entrez_key

Dependencies:askpasscurlhttrjsonlitemimeopensslR6sysXML

Rentrez Tutorial

David winter

Rendered fromrentrez_tutorial.Rmdusingknitr::rmarkdownon May 15 2026.

Last update: 2025-06-12
Started: 2014-06-27