Package: rusda 1.0.8

Franz-Sebastian Krah

rusda: Interface to USDA Databases

An interface to the web service methods provided by the United States Department of Agriculture (USDA). The Agricultural Research Service (ARS) provides a large set of databases. The current version of the package holds interfaces to the Systematic Mycology and Microbiology Laboratory (SMML), which consists of four databases: Fungus-Host Distributions, Specimens, Literature and the Nomenclature database. It provides functions for querying these databases. The main function is \code{associations}, which allows searching for fungus-host combinations.

Authors:Franz-Sebastian Krah

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rusda.pdf |rusda.html✨
rusda/json (API)
NEWS

# Install 'rusda' in R:
install.packages('rusda', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #18

Bug tracker:https://github.com/ropensci/rusda/issues

Pkgdown site:https://docs.ropensci.org

On CRAN:

Conda:

3.51 score 13 stars 5 scripts 35 downloads 1 mentions 7 exports 132 dependencies

Last updated 4 years ago from:fb492630f0 (on master). Checks:7 WARNING, 4 OK. Indexed: yes.

TargetResultTotal time
linux-devel-x86_64WARNING150
pkgdown docsOK191
source / vignettesOK183
linux-release-x86_64WARNING177
macos-release-arm64WARNING228
macos-oldrel-arm64WARNING157
windows-develWARNING85
windows-releaseWARNING86
windows-oldrelWARNING95
wasm-releaseOK132
wasm-oldrelOK155

Exports:associationsgetBPIgetStudyliteraturemeta_smmlsubstratesynonyms_smml

Dependencies:apeaskpassassertthatbackportsbase64encbitbit64bitopsbriobslibcachemcallrcheckmateclicliprclustercodetoolscolorspacecpp11crayoncrulcurldata.tabledescdiffobjdigestdplyrevaluatefarverfastmapfastmatchfontawesomeforeachforeignFormulafsgenericsggplot2gluegridExtragtablehighrHmischmshtmlTablehtmltoolshtmlwidgetshttpcodehttrigraphisobanditeratorsjquerylibjsonliteknitrlabelinglatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimenatservnlmennetopensslpbapplyphangornpillarpkgbuildpkgconfigpkgloadplyrpraiseprettyunitsprocessxprogresspspurrrquadprogR6rappdirsratelimitrRColorBrewerRcppRCurlreadrrentrezrexritisrlangrmarkdownrnclrotlrpartrprojrootrredlistrstudioapisassscalessolriumstringistringrsystaxizetestthattibbletidyselecttinytextriebeardtzdburltoolsutf8vctrsviridisviridisLitevroomwaldoWikidataQueryServiceRWikidataRWikipediRwikitaxawithrworrmsxfunXMLxml2yamlzoo