Package: rusda 1.0.8

Franz-Sebastian Krah

rusda: Interface to USDA Databases

An interface to the web service methods provided by the United States Department of Agriculture (USDA). The Agricultural Research Service (ARS) provides a large set of databases. The current version of the package holds interfaces to the Systematic Mycology and Microbiology Laboratory (SMML), which consists of four databases: Fungus-Host Distributions, Specimens, Literature and the Nomenclature database. It provides functions for querying these databases. The main function is \code{associations}, which allows searching for fungus-host combinations.

Authors:Franz-Sebastian Krah

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rusda.pdf |rusda.html✨
rusda/json (API)
NEWS

# Install 'rusda' in R:
install.packages('rusda', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #18

Bug tracker:https://github.com/ropensci/rusda/issues

Pkgdown/docs site:https://docs.ropensci.org

On CRAN:

Conda:

3.51 score 13 stars 5 scripts 35 downloads 1 mentions 7 exports 131 dependencies

Last updated from:fb492630f0 (on master). Checks:7 WARNING, 3 OK. Indexed: yes.

TargetResultTotal timeArtifact
linux-devel-x86_64WARNING159
pkgdown docsOK163
source / vignettesOK202
linux-release-x86_64WARNING156
macos-release-arm64WARNING77
macos-oldrel-arm64WARNING163
windows-develWARNING93
windows-releaseWARNING81
windows-oldrelWARNING82
wasm-releaseOK147

Exports:associationsgetBPIgetStudyliteraturemeta_smmlsubstratesynonyms_smml

Dependencies:apeaskpassassertthatbackportsbase64encbitbit64bitopsbriobslibcachemcallrcheckmateclicliprclustercodetoolscolorspacecpp11crayoncrulcurldata.tabledescdiffobjdigestdplyrevaluatefarverfastmapfastmatchfontawesomeforeachforeignFormulafsgenericsggplot2gluegridExtragtablehighrHmischmshtmlTablehtmltoolshtmlwidgetshttpcodehttrigraphisobanditeratorsjquerylibjsonliteknitrlabelinglatticelazyevallifecyclemagrittrMatrixmemoisemimenatservnlmennetopensslpbapplyphangornpillarpkgbuildpkgconfigpkgloadplyrpraiseprettyunitsprocessxprogresspspurrrquadprogR6rappdirsratelimitrRColorBrewerRcppRCurlreadrrentrezrexritisrlangrmarkdownrnclrotlrpartrprojrootrredlistrstudioapiS7sassscalessolriumstringistringrsystaxizetestthattibbletidyselecttinytextriebeardtzdburltoolsutf8vctrsviridisviridisLitevroomwaldoWikidataQueryServiceRWikidataRWikipediRwikitaxawithrworrmsxfunXMLxml2yamlzoo