Package: taxadb 0.2.1.99

Carl Boettiger

taxadb: A High-Performance Local Taxonomic Database Interface

Creates a local database of many commonly used taxonomic authorities and provides functions that can quickly query this data.

Authors:Carl Boettiger [aut, cre], Kari Norman [aut], Jorrit Poelen [aut], Scott Chamberlain [aut], Noam Ross [ctb], Mattia Ghilardi [ctb]

taxadb_0.2.1.99.tar.gz
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taxadb.pdf |taxadb.html✨
taxadb/json (API)
NEWS

# Install 'taxadb' in R:
install.packages('taxadb', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #344

Bug tracker:https://github.com/ropensci/taxadb/issues

On CRAN:

Conda:

7.79 score 44 stars 1 packages 66 scripts 1.0k downloads 19 exports 36 dependencies

Last updated from:6c2023d7e1 (on master). Checks:10 OK. Indexed: yes.

TargetResultTotal timeArtifact
linux-devel-x86_64OK150
pkgdown docsOK166
source / vignettesOK180
linux-release-x86_64OK148
macos-release-arm64OK101
macos-oldrel-arm64OK103
windows-develOK95
windows-releaseOK83
windows-oldrelOK105
wasm-releaseOK122

Exports:clean_namescommon_containscommon_starts_withfilter_byfilter_commonfilter_idfilter_namefilter_rankfuzzy_filterget_idsget_namesname_containsname_starts_withtaxa_tbltaxadb_dirtd_connecttd_createtd_disconnecttl_import

Dependencies:askpassblobcachemclicontentidcpp11curlDBIdbplyrdplyrduckdbfastmapfsgenericsgluehttrjsonlitelifecyclemagrittrmemoisemimeopensslpillarpkgconfigpurrrR6rlangstringistringrsystibbletidyrtidyselectutf8vctrswithr

Backends for taxadb

Carl Boettiger, Kari Norman

Rendered frombackends.Rmdusingknitr::rmarkdownon Aug 27 2025.

Last update: 2021-04-28
Started: 2020-01-24

Name Providers and schema used in taxadb

Carl Boettiger, Kari Norman

Rendered fromdata-sources.Rmdusingknitr::rmarkdownon Aug 27 2025.

Last update: 2022-09-12
Started: 2020-01-24