Package: traits 0.5.2
traits: Species Trait Data from Around the Web
Species trait data from many sources, including sequence data from 'NCBI' (<https://www.ncbi.nlm.nih.gov/>), plant traits from 'BETYdb', and data from 'EOL Traitbank' and 'Birdlife International'.
Authors:
traits_0.5.2.tar.gz
traits_0.5.2.zip(r-4.6)traits_0.5.2.zip(r-4.5)traits_0.5.2.zip(r-4.4)
traits_0.5.2.tgz(r-4.5-any)traits_0.5.2.tgz(r-4.4-any)
traits_0.5.2.tar.gz(r-4.6-any)traits_0.5.2.tar.gz(r-4.5-any)
traits_0.5.2.tgz(r-4.4-emscripten)
traits.pdf |traits.html✨
traits/json (API)
NEWS
# Install 'traits' in R: |
install.packages('traits', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ropensci/traits/issues
Pkgdown site:https://docs.ropensci.org
- plantatt - PLANTATT plant traits dataset
traitsapiweb-servicesspeciestaxonomybiodiversityecologyenvironmental-dataspecies-traitsapi-client
Last updated 1 months agofrom:a6d2f02895 (on master). Checks:11 OK. Indexed: yes.
Target | Result | Total time |
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pkgdown docs | OK | 152 |
source / vignettes | OK | 194 |
linux-devel | OK | 150 |
linux-release | OK | 150 |
macos-release-arm64 | OK | 75 |
macos-oldrel-arm64 | OK | 80 |
windows-devel | OK | 104 |
windows-release | OK | 101 |
windows-oldrel | OK | 104 |
wasm-release | OK | 194 |
wasm-oldrel | OK | 212 |
Exports:betydb_citationbetydb_experimentbetydb_querybetydb_recordbetydb_searchbetydb_sitebetydb_speciebetydb_traitbirdlife_habitatbirdlife_threatscoral_locationscoral_methodologiescoral_resourcescoral_speciescoral_taxacoral_traitseol_invasive_fe_nativeg_invasiveis_nativeledancbi_byidncbi_bynamencbi_searchertaxa_searchtr_ernesttr_usdatr_zannetraitbanktraits_cache
Dependencies:apeaskpassassertthatbackportsbase64encbitbit64bslibcachemcheckmateclicliprclustercolorspacecpp11crayoncrulcurldata.tabledigestdplyrevaluatefansifarverfastmapfastmatchfontawesomeforeignFormulafsgenericsggplot2gluegridExtragtablehighrHmischmshoardrhtmlTablehtmltoolshtmlwidgetshttpcodehttrigraphisobandjquerylibjsonliteknitrlabelinglatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimenatservnlmennetopensslpbapplyphangornpillarpkgconfigplyrprettyunitsprogresspurrrquadprogR6rappdirsratelimitrRColorBrewerRcppreadrrentrezrexritisrlangrmarkdownrnclrotlrpartrredlistrstudioapirvestsassscalesselectrsolriumstringistringrsystaxizetibbletidyselecttinytextriebeardtzdburltoolsutf8vctrsviridisviridisLitevroomWikidataQueryServiceRWikidataRWikipediRwikitaxawithrworrmsxfunXMLxml2yamlzoo
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Search for traits from BETYdb | betydb betydb_citation betydb_experiment betydb_record betydb_site betydb_specie betydb_trait |
Query a BETY table | betydb_query betydb_search |
Get bird habitat information from BirdLife/IUCN | birdlife_habitat |
Get bird threat information from BirdLife/IUCN | birdlife_threats |
Access LEDA trait data | leda |
Retrieve gene sequences from NCBI by accession number. | ncbi_byid |
Retrieve gene sequences from NCBI by taxon name and gene names. | ncbi_byname |
Search for gene sequences available for taxa from NCBI. | ncbi_searcher |
PLANTATT plant traits dataset | plantatt |
Search for traits by taxa names | taxa_search |
Amniote life history dataset | tr_ernest |
Zanne et al. plant dataset | tr_zanne |
Search for traits from EOL's Traitbank | traitbank |
Caching | traits_cache |
Defunct functions in traits | traits-defunct |