Package: mcbette 1.15.3
mcbette: Model Comparison Using 'babette'
'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'mcbette' allows to do a Bayesian model comparison over some site and clock models, using 'babette' (<https://github.com/ropensci/babette/>).
Authors:
mcbette_1.15.3.tar.gz
mcbette_1.15.3.zip(r-4.6)mcbette_1.15.3.zip(r-4.5)mcbette_1.15.3.zip(r-4.4)
mcbette_1.15.3.tgz(r-4.5-any)mcbette_1.15.3.tgz(r-4.4-any)
mcbette_1.15.3.tar.gz(r-4.6-any)mcbette_1.15.3.tar.gz(r-4.5-any)
mcbette_1.15.3.tgz(r-4.4-emscripten)
mcbette.pdf |mcbette.html✨
mcbette/json (API)
# Install 'mcbette' in R: |
install.packages('mcbette', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org')) |
Reviews:rOpenSci Software Review #360
Bug tracker:https://github.com/ropensci/mcbette/issues
Pkgdown site:https://docs.ropensci.org
Last updated 10 months agofrom:c223b0f362 (on master). Checks:7 OK, 2 NOTE, 1 FAIL. Indexed: yes.
Target | Result | Total time |
---|---|---|
source / vignettes | OK | 458 |
pkgdown docs | OK | 361 |
linux-devel-x86_64 | OK | 355 |
linux-release-x86_64 | OK | 308 |
macos-release-arm64 | OK | 72 |
macos-oldrel-arm64 | NOTE | 98 |
windows-devel | OK | 95 |
windows-release | OK | 114 |
windows-oldrel | NOTE | 115 |
wasm-release | FAIL | 457 |
Exports:calc_weightscan_run_mcbettecheck_beast2_ns_pkgcheck_marg_likscheck_mcbette_stateest_marg_likest_marg_liksget_mcbette_stateget_test_marg_liksinterpret_bayes_factorinterpret_marg_lik_estimatesmcbette_reportmcbette_self_testplot_marg_liksset_mcbette_state
Dependencies:ade4apeaskpassbabettebase64encbeastierbeautierbitbit64brewbriobslibcachemcallrclicliprcommonmarkcpp11crayoncredentialscurldescdevtoolsdiffobjdigestdownlitellipsisevaluatefansifastmapfastmatchfontawesomefsgenericsgertghgitcredsgluegmphighrhmshtmltoolshtmlwidgetshttpuvhttr2igraphinijquerylibjsonliteknitrlaterlatticelifecyclemagrittrMASSMatrixmauricermemoisemimeminiUInlmeopensslphangornpillarpixmappkgbuildpkgconfigpkgdownpkgloadpraiseprettyunitsprocessxprofvisprogresspromisespspurrrquadprogR6raggrappdirsrcmdcheckRcppRcppArmadilloreadrremotesrJavarlangrmarkdownRmpfrroxygen2rprojrootrstudioapirversionssasssegmentedseqinrsessioninfoshinysourcetoolsspstringistringrsyssystemfontstestittestthattextshapingtibbletidyselecttinytextracerertxtplottzdburlcheckerusethisutf8vctrsvroomwaldowhiskerwithrxfunxml2xopenxtableyamlzip