Package: mcbette 1.15.3
mcbette: Model Comparison Using 'babette'
'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'mcbette' allows to do a Bayesian model comparison over some site and clock models, using 'babette' (<https://github.com/ropensci/babette/>).
Authors:
mcbette_1.15.3.tar.gz
mcbette_1.15.3.zip(r-4.5)mcbette_1.15.3.zip(r-4.4)mcbette_1.15.3.zip(r-4.3)
mcbette_1.15.3.tgz(r-4.4-any)mcbette_1.15.3.tgz(r-4.3-any)
mcbette_1.15.3.tar.gz(r-4.5-noble)mcbette_1.15.3.tar.gz(r-4.4-noble)
mcbette_1.15.3.tgz(r-4.4-emscripten)mcbette_1.15.3.tgz(r-4.3-emscripten)
mcbette.pdf |mcbette.html✨
mcbette/json (API)
# Install 'mcbette' in R: |
install.packages('mcbette', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ropensci/mcbette/issues
Last updated 2 months agofrom:c223b0f362 (on master). Checks:OK: 3 NOTE: 4. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 28 2024 |
R-4.5-win | OK | Sep 28 2024 |
R-4.5-linux | OK | Sep 28 2024 |
R-4.4-win | NOTE | Sep 28 2024 |
R-4.4-mac | NOTE | Sep 28 2024 |
R-4.3-win | NOTE | Sep 28 2024 |
R-4.3-mac | NOTE | Sep 28 2024 |
Exports:calc_weightscan_run_mcbettecheck_beast2_ns_pkgcheck_marg_likscheck_mcbette_stateest_marg_likest_marg_liksget_mcbette_stateget_test_marg_liksinterpret_bayes_factorinterpret_marg_lik_estimatesmcbette_reportmcbette_self_testplot_marg_liksset_mcbette_state
Dependencies:ade4apeaskpassbabettebase64encbeastierbeautierbitbit64brewbriobslibcachemcallrclicliprcommonmarkcpp11crayoncredentialscurldescdevtoolsdiffobjdigestdownlitellipsisevaluatefansifastmapfastmatchfontawesomefsgenericsgertghgitcredsgluegmphighrhmshtmltoolshtmlwidgetshttpuvhttr2igraphinijquerylibjsonliteknitrlaterlatticelifecyclemagrittrMASSMatrixmauricermemoisemimeminiUInlmeopensslphangornpillarpixmappkgbuildpkgconfigpkgdownpkgloadpraiseprettyunitsprocessxprofvisprogresspromisespspurrrquadprogR6raggrappdirsrcmdcheckRcppRcppArmadilloreadrrematch2remotesrJavarlangrmarkdownRmpfrroxygen2rprojrootrstudioapirversionssasssegmentedseqinrsessioninfoshinysourcetoolsspstringistringrsyssystemfontstestittestthattextshapingtibbletidyselecttinytextracerertxtplottzdburlcheckerusethisutf8vctrsvroomwaldowhiskerwithrxfunxml2xopenxtableyamlzip