Package: rmangal 2.2.0

Kevin Cazelles

rmangal: 'Mangal' Client

An interface to the 'Mangal' database - a collection of ecological networks. This package includes functions to work with the 'Mangal RESTful API' methods (<https://mangal-interactions.github.io/mangal-api/>).

Authors:Steve Vissault [aut, ctb], Kevin Cazelles [aut, cre], Gabriel Bergeron [aut, ctb], Benjamin Mercier [aut, ctb], Clément Violet [aut, ctb], Dominique Gravel [aut], Timothée Poisot [aut], Thomas Lin Pedersen [rev], Anna Willoughby [rev]

rmangal_2.2.0.tar.gz
rmangal_2.2.0.zip(r-4.6)rmangal_2.2.0.zip(r-4.5)rmangal_2.2.0.zip(r-4.4)
rmangal_2.2.0.tgz(r-4.5-any)rmangal_2.2.0.tgz(r-4.4-any)
rmangal_2.2.0.tar.gz(r-4.6-any)rmangal_2.2.0.tar.gz(r-4.5-any)
rmangal_2.2.0.tgz(r-4.5-emscripten)
rmangal.pdf |rmangal.html✨
rmangal/json (API)
NEWS

# Install 'rmangal' in R:

install.packages('rmangal', repos = c('https://packages.ropensci.org', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #332

Bug tracker:https://github.com/ropensci/rmangal/issues

Pkgdown/docs site:https://docs.ropensci.org

Datasets:

rmangal_endpoints - Mangal API's endpoints

On CRAN:

ecology networks food webs interactions data publications open access

5.57 score 15 stars 35 scripts 54 downloads 15 exports 20 dependencies

Last updated from:8d6236a4a9 (on main). Checks:10 OK. Indexed: yes.

Target	Result	Total time
linux-devel-x86_64	OK	176
pkgdown docs	OK	224
source / vignettes	OK	280
linux-release-x86_64	OK	192
macos-release-arm64	OK	154
macos-oldrel-arm64	OK	182
windows-devel	OK	152
windows-release	OK	127
windows-oldrel	OK	127
wasm-release	OK	136

Exports:as.igraph combine_mgNetworks get_citation get_collection get_network_by_id get_network_by_id_indiv rmangal_request rmangal_request_singleton search_datasets search_interactions search_networks search_networks_sf search_nodes search_references search_taxonomy

Dependencies:askpass cli cpp11 curl glue httr2 igraph jsonlite lattice lifecycle magrittr Matrix openssl pkgconfig R6 rappdirs rlang sys vctrs withr

Get started with rmangal

Steve Vissault, Kevin Cazelles

Rendered fromrmangal.Rmdusingknitr::rmarkdownon Dec 03 2025.

Last update: 2025-11-14
Started: 2019-06-16

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Coerce 'mgNetworksCollection' or 'mgNetwork' objects to 'igraph' objects.	as.igraph.mgNetwork as.igraph.mgNetworksCollection
List interactions type contained in mangal-db	avail_type
Combine Mangal networks	combine_mgNetworks
Retrieve all references pertaining to the networks collection or individual network	get_citation get_citation.mgNetwork get_citation.mgNetworksCollection
Get a collection of networks	get_collection get_collection.default get_collection.mgSearchDatasets get_collection.mgSearchInteractions get_collection.mgSearchNetworks get_collection.mgSearchNodes get_collection.mgSearchReferences get_collection.mgSearchTaxonomy
Retrieve network information, nodes, edges and references for a given set of Mangal network IDs	get_network_by_id get_network_by_id_indiv print.mgNetwork print.mgNetworksCollection summary.mgNetwork summary.mgNetworksCollection
Mangal API's endpoints	rmangal_endpoints
Low-level request function for the Mangal API	rmangal_request rmangal_request_singleton
Query datasets	search_datasets
Query interactions	search_interactions
Query networks	search_networks search_networks_sf
Query nodes	search_nodes
Query references	search_references
Query taxonomy	search_taxonomy